Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05216331_10828 | Not Available | Negative | 1182556 - 1183797 | 46698.8 |
| smr domain-containing protein | SAMN05216331_10829 | Not Available | Positive | 1183973 - 1185022 | 40303.2 |
| late embryogenesis abundant protein | SAMN05216331_10830 | Not Available | Positive | 1185041 - 1185634 | 21292.1 |
| acyl-acp thioesterase | SAMN05216331_10831 | Not Available | Negative | 1185680 - 1186435 | 28787.1 |
| l-serine ammonia-lyase | SAMN05216331_10832 | Not Available | Positive | 1186639 - 1187853 | 43130.5 |
| holliday junction dna helicase subunit ruva | SAMN05216331_10833 | Not Available | Positive | 1187944 - 1188534 | 21368.9 |
| cell surface protein spra | SAMN05216331_10834 | Not Available | Positive | 1188843 - 1195850 | 266068.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05216331_10835 | Not Available | Positive | 1196138 - 1197694 | 59903.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05216331_10836 | Not Available | Positive | 1197696 - 1198412 | 27423.3 |
| hypothetical protein | SAMN05216331_10837 | Not Available | Positive | 1198555 - 1199280 | 27555.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
