Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05216331_1088 | Not Available | Positive | 1153272 - 1154048 | 29322.2 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05216331_1089 | Not Available | Positive | 1154079 - 1155206 | 43240.8 |
| outer membrane protein tolc | SAMN05216331_10810 | Not Available | Negative | 1155211 - 1156695 | 56902.5 |
| putative abc transport system atp-binding protein | SAMN05216331_10811 | Not Available | Negative | 1156826 - 1157524 | 25901.2 |
| putative abc transport system permease protein | SAMN05216331_10812 | Not Available | Negative | 1157538 - 1158776 | 45848.9 |
| multidrug resistance efflux pump | SAMN05216331_10813 | Not Available | Negative | 1158786 - 1159787 | 38185.4 |
| rnd family efflux transporter, mfp subunit | SAMN05216331_10814 | Not Available | Negative | 1159884 - 1161125 | 46350.5 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN05216331_10815 | Not Available | Negative | 1161162 - 1162352 | 44914.2 |
| formate-tetrahydrofolate ligase | SAMN05216331_10816 | Not Available | Negative | 1162604 - 1164268 | 59946.7 |
| excinuclease abc subunit b | SAMN05216331_10817 | Not Available | Negative | 1164349 - 1166358 | 76407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
