Porphyromonadaceae bacterium KH3R12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KH3R12 is a member of the Porphyromonadaceae family, characterized by having a single replicon. This trait indicates a streamlined genetic structure, which may contribute to its adaptability in various environments. The genetic information of this bacterium is cataloged under the accession number FNQW00000000.1, providing a reference point for further studies regarding its taxonomy and potential applications. The Porphyromonadaceae family includes bacteria that are often associated with anaerobic environments, such as the gastrointestinal tracts of animals and soil. This ecological niche suggests that Porphyromonadaceae bacterium KH3R12 may play a significant role in nutrient cycling and interactions within its habitat. Additionally, bacteria from this family are known for their potential in biotechnological applications due to their metabolic versatility. Understanding the specific functions and ecological roles of Porphyromonadaceae bacterium KH3R12 could provide insights into its contributions to microbial communities and ecosystem health. The single replicon characteristic may also imply a less complex regulatory system, potentially allowing for rapid responses to environmental changes. Further research into this bacterium's metabolic pathways and its interactions within its ecosystem may uncover valuable information about its ecological significance and potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KH3R12 genome assembly, contig:

Gene Summary

Adenine Count

1172546 bp

Thymine Count

1169459 bp

Guanine Count

899054 bp

Cytosine Count

910252 bp

Genome Length

4154516 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphoryl diester phosphodiesteraseSAMN05216331_1088Not AvailablePositive1153272 - 115404829322.2
oxygen-independent coproporphyrinogen-3 oxidaseSAMN05216331_1089Not AvailablePositive1154079 - 115520643240.8
outer membrane protein tolcSAMN05216331_10810Not AvailableNegative1155211 - 115669556902.5
putative abc transport system atp-binding proteinSAMN05216331_10811Not AvailableNegative1156826 - 115752425901.2
putative abc transport system permease proteinSAMN05216331_10812Not AvailableNegative1157538 - 115877645848.9
multidrug resistance efflux pumpSAMN05216331_10813Not AvailableNegative1158786 - 115978738185.4
rnd family efflux transporter, mfp subunitSAMN05216331_10814Not AvailableNegative1159884 - 116112546350.5
multidrug efflux pump subunit acra (membrane-fusion protein)SAMN05216331_10815Not AvailableNegative1161162 - 116235244914.2
formate-tetrahydrofolate ligaseSAMN05216331_10816Not AvailableNegative1162604 - 116426859946.7
excinuclease abc subunit bSAMN05216331_10817Not AvailableNegative1164349 - 116635876407.1

Displaying genes 881 – 890 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.