Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05216331_10773 | Not Available | Negative | 1118391 - 1122656 | 163390.0 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN05216331_10774 | Not Available | Negative | 1122674 - 1124614 | 73033.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05216331_10775 | Not Available | Positive | 1124881 - 1125570 | 27211.8 |
| glycosyl hydrolases family 28 | SAMN05216331_10776 | Not Available | Negative | 1125728 - 1127056 | 50420.3 |
| polygalacturonase | SAMN05216331_10777 | Not Available | Negative | 1127102 - 1128793 | 62788.4 |
| rhamnogalacturonan endolyase/rhamnogalacturonan exolyase | SAMN05216331_10778 | Not Available | Negative | 1128815 - 1130641 | 68294.1 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05216331_10779 | Not Available | Negative | 1130653 - 1131816 | 44654.6 |
| protein of unknown function | SAMN05216331_10780 | Not Available | Negative | 1131912 - 1135520 | 135568.0 |
| hypothetical protein | SAMN05216331_10781 | Not Available | Negative | 1135646 - 1137772 | 80559.6 |
| pectate lyase | SAMN05216331_10782 | Not Available | Negative | 1137783 - 1140155 | 88467.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
