Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN05216331_10763 | Not Available | Negative | 1098421 - 1100766 | 88944.1 |
| duf1680 family protein | SAMN05216331_10764 | Not Available | Negative | 1100958 - 1105145 | 159271.0 |
| hypothetical protein | SAMN05216331_10765 | Not Available | Negative | 1105310 - 1106365 | 39728.0 |
| alpha-l-arabinofuranosidase | SAMN05216331_10766 | Not Available | Negative | 1106700 - 1109300 | 98119.0 |
| solute:na+ symporter, sss family | SAMN05216331_10767 | Not Available | Negative | 1109453 - 1111198 | 64314.9 |
| l-ribulokinase | SAMN05216331_10768 | Not Available | Negative | 1111239 - 1112897 | 60684.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05216331_10769 | Not Available | Negative | 1112986 - 1114017 | 39091.5 |
| l-arabinose isomerase | SAMN05216331_10770 | Not Available | Negative | 1114038 - 1115540 | 56011.2 |
| l-ribulose 5-phosphate 4-epimerase | SAMN05216331_10771 | Not Available | Negative | 1115633 - 1116322 | 25392.3 |
| alpha-n-arabinofuranosidase | SAMN05216331_10772 | Not Available | Negative | 1116544 - 1118085 | 57983.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
