Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase (glycosyl hydrolase family 5) | SAMN05216331_10743 | Not Available | Positive | 1076027 - 1076275 | 9486.23 |
| Trna-pro | Not Available | Not Available | Positive | 1076385 - 1076463 | Not Available |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05216331_10745 | Not Available | Positive | 1076714 - 1077760 | 37124.7 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase /udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05216331_10746 | Not Available | Positive | 1077985 - 1079367 | 51652.6 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05216331_10747 | Not Available | Positive | 1079386 - 1080174 | 28531.2 |
| agmatine deiminase | SAMN05216331_10748 | Not Available | Positive | 1080179 - 1081201 | 38577.7 |
| n-carbamoylputrescine amidase | SAMN05216331_10749 | Not Available | Positive | 1081310 - 1082182 | 33046.1 |
| hypothetical protein | SAMN05216331_10750 | Not Available | Negative | 1082487 - 1083722 | 46633.5 |
| electron transport complex protein rnfa | SAMN05216331_10751 | Not Available | Negative | 1084006 - 1084590 | 20758.8 |
| electron transport complex protein rnfe | SAMN05216331_10752 | Not Available | Negative | 1084604 - 1085200 | 21166.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
