Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216331_10712 | Not Available | Negative | 1041995 - 1042516 | 20303.5 |
| hypothetical protein | SAMN05216331_10713 | Not Available | Positive | 1043008 - 1043466 | 17881.1 |
| 3-dehydroquinate synthase | SAMN05216331_10714 | Not Available | Negative | 1043473 - 1044528 | 39481.0 |
| beta-glucosidase | SAMN05216331_10715 | Not Available | Negative | 1044540 - 1047524 | 110487.0 |
| 5'-nucleotidase | SAMN05216331_10716 | Not Available | Negative | 1047616 - 1048449 | 31447.3 |
| 5'-nucleotidase, c-terminal domain | SAMN05216331_10717 | Not Available | Negative | 1048510 - 1049259 | 28034.8 |
| large subunit ribosomal protein l19 | SAMN05216331_10718 | Not Available | Positive | 1049469 - 1049819 | 13366.5 |
| dna replication and repair protein reco | SAMN05216331_10719 | Not Available | Positive | 1049981 - 1050703 | 28448.3 |
| thiamine diphosphokinase | SAMN05216331_10720 | Not Available | Negative | 1050789 - 1051418 | 23202.5 |
| regulator of cell morphogenesis and no signaling | SAMN05216331_10721 | Not Available | Negative | 1051537 - 1052262 | 27827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
