Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-haloacid dehalogenase | SAMN05216331_10676 | Not Available | Positive | 1005345 - 1005950 | 23498.2 |
| lysm domain-containing protein | SAMN05216331_10677 | Not Available | Positive | 1006056 - 1007042 | 36665.6 |
| peptide chain release factor 2 | SAMN05216331_10678 | Not Available | Positive | 1007374 - 1008330 | 36282.5 |
| predicted purr-regulated permease perm | SAMN05216331_10679 | Not Available | Positive | 1008330 - 1009412 | 39728.1 |
| tigr02757 family protein | SAMN05216331_10680 | Not Available | Negative | 1009448 - 1010215 | 29949.9 |
| trypsin | SAMN05216331_10681 | Not Available | Positive | 1010365 - 1012635 | 84049.0 |
| membrane-bound lytic murein transglycosylase d | SAMN05216331_10682 | Not Available | Negative | 1012636 - 1014345 | 63823.9 |
| hypothetical protein | SAMN05216331_10683 | Not Available | Negative | 1014393 - 1015160 | 28678.1 |
| chromosome segregation dna-binding protein | SAMN05216331_10684 | Not Available | Negative | 1015170 - 1016078 | 33959.8 |
| chromosome segregation atpase | SAMN05216331_10685 | Not Available | Negative | 1016104 - 1016868 | 27911.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
