Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_10666 | Not Available | Negative | 990504 - 992165 | 61688.6 |
| pectate lyase | SAMN05216331_10667 | Not Available | Negative | 992220 - 993914 | 62434.3 |
| starch-binding associating with outer membrane | SAMN05216331_10668 | Not Available | Negative | 994087 - 996384 | 86641.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_10669 | Not Available | Negative | 996413 - 999913 | 130455.0 |
| sugar phosphate isomerase/epimerase | SAMN05216331_10670 | Not Available | Negative | 1000081 - 1001016 | 35868.4 |
| hypothetical protein | SAMN05216331_10671 | Not Available | Negative | 1001246 - 1001419 | 6270.63 |
| hypothetical protein | SAMN05216331_10672 | Not Available | Positive | 1001478 - 1002659 | 44709.7 |
| hypothetical protein | SAMN05216331_10673 | Not Available | Positive | 1002795 - 1003172 | 13772.7 |
| tigr00375 family protein | SAMN05216331_10674 | Not Available | Positive | 1003193 - 1004683 | 56351.2 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05216331_10675 | Not Available | Positive | 1004667 - 1005152 | 18765.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
