Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN05216331_10656 | Not Available | Negative | 970520 - 974314 | 143926.0 |
| putative collagen-binding domain of a collagenase | SAMN05216331_10657 | Not Available | Negative | 974328 - 975782 | 56049.2 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05216331_10658 | Not Available | Negative | 975861 - 977063 | 45905.1 |
| alpha-l-fucosidase 2 | SAMN05216331_10659 | Not Available | Negative | 977252 - 979714 | 92572.6 |
| glycosyl hydrolases family 28 | SAMN05216331_10660 | Not Available | Negative | 979781 - 982663 | 107976.0 |
| alpha-l-rhamnosidase n-terminal domain-containing protein | SAMN05216331_10661 | Not Available | Negative | 982763 - 985480 | 103060.0 |
| trehalase | SAMN05216331_10662 | Not Available | Negative | 985470 - 988796 | 128946.0 |
| glycosyl hydrolases family 43 | SAMN05216331_10663 | Not Available | Negative | 988808 - 989740 | 35809.3 |
| protein of unknown function | SAMN05216331_10664 | Not Available | Negative | 989740 - 990411 | 26499.9 |
| hypothetical protein | SAMN05216331_10665 | Not Available | Negative | 990416 - 990544 | 5038.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
