Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216331_10646 | Not Available | Negative | 954282 - 954977 | 26743.8 |
| hypothetical protein | SAMN05216331_10647 | Not Available | Negative | 954991 - 957723 | 103622.0 |
| alpha-l-rhamnosidase | SAMN05216331_10648 | Not Available | Negative | 957773 - 959977 | 85138.8 |
| predicted dehydrogenase | SAMN05216331_10649 | Not Available | Negative | 959993 - 961066 | 41210.8 |
| hypothetical protein | SAMN05216331_10650 | Not Available | Negative | 961069 - 962919 | 70188.7 |
| hypothetical protein | SAMN05216331_10651 | Not Available | Negative | 962929 - 964965 | 77233.8 |
| starch-binding associating with outer membrane | SAMN05216331_10652 | Not Available | Negative | 965300 - 967075 | 67234.8 |
| transposase, is5 family | SAMN05216331_10653 | Not Available | Positive | 967424 - 968362 | 36450.1 |
| transposase, is5 family | SAMN05216331_10654 | Not Available | Positive | 968332 - 968751 | 16590.3 |
| dde superfamily endonuclease | SAMN05216331_10655 | Not Available | Negative | 968823 - 970271 | 55935.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
