Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase | SAMN05216331_10636 | Not Available | Negative | 932709 - 936089 | 127757.0 |
| beta galactosidase small chain | SAMN05216331_10637 | Not Available | Negative | 936089 - 938959 | 108929.0 |
| beta-galactosidase | SAMN05216331_10638 | Not Available | Negative | 939241 - 942513 | 125248.0 |
| protein of unknown function | SAMN05216331_10639 | Not Available | Negative | 942590 - 946810 | 161107.0 |
| vitamin b12 dependent methionine synthase, activation domain | SAMN05216331_10640 | Not Available | Negative | 946794 - 947513 | 26973.3 |
| uroporphyrinogen decarboxylase | SAMN05216331_10641 | Not Available | Negative | 947526 - 948524 | 36505.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05216331_10642 | Not Available | Negative | 948536 - 949219 | 24476.1 |
| solute:na+ symporter, sss family | SAMN05216331_10643 | Not Available | Negative | 949406 - 950959 | 57016.6 |
| hypothetical protein | SAMN05216331_10644 | Not Available | Negative | 950983 - 952047 | 41466.3 |
| alpha-d-xyloside xylohydrolase | SAMN05216331_10645 | Not Available | Negative | 952065 - 954281 | 85365.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
