Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_1065 | Not Available | Positive | 892103 - 892651 | 19696.5 |
| gdpmannose 4,6-dehydratase | SAMN05216331_1066 | Not Available | Positive | 892659 - 893720 | 40424.4 |
| gdp-l-fucose synthase | SAMN05216331_1067 | Not Available | Positive | 893764 - 894834 | 40367.3 |
| tyrosine phenol-lyase | SAMN05216331_1068 | Not Available | Positive | 895001 - 896383 | 52295.8 |
| dtdp-glucose 4,6-dehydratase | SAMN05216331_1069 | Not Available | Negative | 896380 - 897426 | 39623.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05216331_10610 | Not Available | Negative | 897557 - 898084 | 20348.1 |
| glucose-1-phosphate thymidylyltransferase | SAMN05216331_10611 | Not Available | Negative | 898187 - 899056 | 32024.7 |
| trna (guanine37-n1)-methyltransferase | SAMN05216331_10612 | Not Available | Negative | 899286 - 899960 | 25335.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216331_10613 | Not Available | Negative | 900029 - 902530 | 91914.8 |
| hypothetical protein | SAMN05216331_10614 | Not Available | Positive | 902901 - 904034 | 43016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
