Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimp | SAMN05216331_10565 | Not Available | Positive | 821337 - 821804 | 17677.9 |
| nusa antitermination factor | SAMN05216331_10566 | Not Available | Positive | 821808 - 823202 | 52959.0 |
| translation initiation factor if-2 | SAMN05216331_10567 | Not Available | Positive | 823279 - 826380 | 115470.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216331_10568 | Not Available | Positive | 826596 - 827120 | 19912.9 |
| glutamate racemase | SAMN05216331_10569 | Not Available | Positive | 827239 - 827997 | 29040.8 |
| membrane protein required for colicin v production | SAMN05216331_10570 | Not Available | Positive | 827994 - 828575 | 22038.6 |
| phosphatidylserine decarboxylase | SAMN05216331_10571 | Not Available | Positive | 828731 - 829411 | 25436.2 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN05216331_10572 | Not Available | Positive | 829418 - 830116 | 25783.4 |
| hypothetical protein | SAMN05216331_10573 | Not Available | Negative | 830209 - 830346 | 5489.67 |
| hypothetical protein | SAMN05216331_10574 | Not Available | Positive | 830417 - 830629 | 8369.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
