Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05216331_10555 | Not Available | Positive | 808957 - 810156 | 46110.3 |
| do/deqq family serine protease | SAMN05216331_10556 | Not Available | Positive | 810491 - 812023 | 54707.5 |
| rna polymerase primary sigma factor | SAMN05216331_10557 | Not Available | Positive | 812227 - 813087 | 32784.3 |
| ompa family protein | SAMN05216331_10558 | Not Available | Positive | 813369 - 814523 | 42949.3 |
| alanine racemase | SAMN05216331_10559 | Not Available | Negative | 814626 - 817094 | 93002.3 |
| gscfa family protein | SAMN05216331_10560 | Not Available | Negative | 817136 - 818107 | 37980.7 |
| hypothetical protein | SAMN05216331_10561 | Not Available | Negative | 818259 - 818432 | 6966.62 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05216331_10562 | Not Available | Negative | 818542 - 819735 | 44001.9 |
| 3'-5' exonuclease | SAMN05216331_10563 | Not Available | Negative | 819792 - 820361 | 21523.8 |
| protein of unknown function | SAMN05216331_10564 | Not Available | Negative | 820358 - 820930 | 22090.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
