Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine or glycine:cation symporter, agcs family | SAMN05216331_1055 | Not Available | Positive | 744341 - 746041 | 62009.8 |
| methionyl-trna synthetase | SAMN05216331_1056 | Not Available | Positive | 746310 - 748352 | 77400.2 |
| hypothetical protein | SAMN05216331_1057 | Not Available | Positive | 748562 - 749083 | 19218.9 |
| membrane protein yfho | SAMN05216331_1058 | Not Available | Positive | 749288 - 751798 | 93945.4 |
| uncharacterized lipoprotein nlpe involved in copper resistance | SAMN05216331_1059 | Not Available | Positive | 752034 - 752846 | 30252.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05216331_10510 | Not Available | Positive | 752843 - 753496 | 24540.3 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05216331_10511 | Not Available | Negative | 753474 - 756446 | 114279.0 |
| hypothetical protein | SAMN05216331_10512 | Not Available | Negative | 756545 - 756754 | 8096.72 |
| hypothetical protein | SAMN05216331_10513 | Not Available | Negative | 756759 - 756992 | 9003.8 |
| susd family protein | SAMN05216331_10514 | Not Available | Positive | 757058 - 757753 | 26817.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
