Porphyromonadaceae bacterium KH3R12

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Description

Porphyromonadaceae bacterium KH3R12 is a member of the Porphyromonadaceae family, characterized by having a single replicon. This trait indicates a streamlined genetic structure, which may contribute to its adaptability in various environments. The genetic information of this bacterium is cataloged under the accession number FNQW00000000.1, providing a reference point for further studies regarding its taxonomy and potential applications. The Porphyromonadaceae family includes bacteria that are often associated with anaerobic environments, such as the gastrointestinal tracts of animals and soil. This ecological niche suggests that Porphyromonadaceae bacterium KH3R12 may play a significant role in nutrient cycling and interactions within its habitat. Additionally, bacteria from this family are known for their potential in biotechnological applications due to their metabolic versatility. Understanding the specific functions and ecological roles of Porphyromonadaceae bacterium KH3R12 could provide insights into its contributions to microbial communities and ecosystem health. The single replicon characteristic may also imply a less complex regulatory system, potentially allowing for rapid responses to environmental changes. Further research into this bacterium's metabolic pathways and its interactions within its ecosystem may uncover valuable information about its ecological significance and potential uses in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonadaceae bacterium KH3R12 genome assembly, contig:

Gene Summary

Adenine Count

1172546 bp

Thymine Count

1169459 bp

Guanine Count

899054 bp

Cytosine Count

910252 bp

Genome Length

4154516 bp

Protein-coding Genes

3334 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine or glycine:cation symporter, agcs familySAMN05216331_1055Not AvailablePositive744341 - 74604162009.8
methionyl-trna synthetaseSAMN05216331_1056Not AvailablePositive746310 - 74835277400.2
hypothetical proteinSAMN05216331_1057Not AvailablePositive748562 - 74908319218.9
membrane protein yfhoSAMN05216331_1058Not AvailablePositive749288 - 75179893945.4
uncharacterized lipoprotein nlpe involved in copper resistanceSAMN05216331_1059Not AvailablePositive752034 - 75284630252.3
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN05216331_10510Not AvailablePositive752843 - 75349624540.3
pd-(d/e)xk nuclease superfamily proteinSAMN05216331_10511Not AvailableNegative753474 - 756446114279.0
hypothetical proteinSAMN05216331_10512Not AvailableNegative756545 - 7567548096.72
hypothetical proteinSAMN05216331_10513Not AvailableNegative756759 - 7569929003.8
susd family proteinSAMN05216331_10514Not AvailablePositive757058 - 75775326817.6

Displaying genes 581 – 590 of 3385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.