Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05216331_10497 | Not Available | Positive | 706845 - 707543 | 26263.5 |
| iron complex outermembrane recepter protein | SAMN05216331_10498 | Not Available | Positive | 707498 - 707806 | 11278.9 |
| iron complex outermembrane recepter protein | SAMN05216331_10499 | Not Available | Positive | 707843 - 708934 | 40698.4 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05216331_104100 | Not Available | Negative | 709079 - 710599 | 59048.0 |
| transporter, cpa2 family | SAMN05216331_104101 | Not Available | Negative | 710705 - 712774 | 75655.0 |
| excinuclease abc subunit a | SAMN05216331_104102 | Not Available | Positive | 712936 - 715785 | 106561.0 |
| protein of unknown function | SAMN05216331_104103 | Not Available | Positive | 715851 - 716108 | 10044.3 |
| protein of unknown function | SAMN05216331_104104 | Not Available | Positive | 716105 - 716386 | 11059.3 |
| protein of unknown function | SAMN05216331_104105 | Not Available | Negative | 716416 - 716799 | 14424.2 |
| interferon-induced transmembrane protein | SAMN05216331_104106 | Not Available | Negative | 716808 - 717212 | 15171.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
