Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | SAMN05216331_10477 | Not Available | Positive | 671034 - 671900 | 31974.3 |
| zinc protease | SAMN05216331_10478 | Not Available | Positive | 672009 - 674813 | 105891.0 |
| starch-binding associating with outer membrane | SAMN05216331_10479 | Not Available | Negative | 674933 - 676486 | 58369.3 |
| iron complex outermembrane recepter protein | SAMN05216331_10480 | Not Available | Negative | 676505 - 679447 | 110034.0 |
| mfs transporter, nhs family, nucleoside permease/mfs transporter, nhs family, xanthosine permease | SAMN05216331_10481 | Not Available | Negative | 679787 - 681067 | 46847.4 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05216331_10482 | Not Available | Negative | 681129 - 682484 | 51963.0 |
| protein of unknown function | SAMN05216331_10483 | Not Available | Negative | 682621 - 683469 | 32413.8 |
| lipopolysaccharide biosynthesis regulator ycim, contains six tpr domains and a predicted metal-binding c-terminal domain | SAMN05216331_10484 | Not Available | Negative | 683472 - 685229 | 67485.9 |
| dutp pyrophosphatase | SAMN05216331_10485 | Not Available | Negative | 685303 - 685737 | 15880.1 |
| hypothetical protein | SAMN05216331_10486 | Not Available | Positive | 685922 - 686644 | 28055.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
