Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_10437 | Not Available | Negative | 627922 - 628989 | 40627.5 |
| putative efflux protein, mate family | SAMN05216331_10438 | Not Available | Negative | 629123 - 630445 | 49380.6 |
| l-aspartate 1-decarboxylase | SAMN05216331_10439 | Not Available | Negative | 630512 - 630862 | 12841.5 |
| pantothenate synthetase | SAMN05216331_10440 | Not Available | Negative | 630870 - 631712 | 31757.0 |
| starch synthase | SAMN05216331_10441 | Not Available | Positive | 631910 - 632728 | 31740.7 |
| protein of unknown function | SAMN05216331_10442 | Not Available | Positive | 632746 - 634251 | 56698.6 |
| holliday junction dna helicase subunit ruvb | SAMN05216331_10443 | Not Available | Negative | 634367 - 635392 | 37775.3 |
| epoxyqueuosine reductase | SAMN05216331_10444 | Not Available | Negative | 635413 - 636333 | 34945.8 |
| ribonuclease r | SAMN05216331_10445 | Not Available | Negative | 636348 - 638492 | 81975.1 |
| nucleoside-diphosphate-sugar epimerase | SAMN05216331_10446 | Not Available | Positive | 638929 - 639942 | 38655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
