Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, beta chain | SAMN05216331_10136 | Not Available | Positive | 51645 - 52820 | 42810.1 |
| anthranilate synthase, component i | SAMN05216331_10137 | Not Available | Positive | 52944 - 54350 | 53004.6 |
| anthranilate synthase, component ii | SAMN05216331_10138 | Not Available | Positive | 54362 - 54931 | 20891.2 |
| anthranilate phosphoribosyltransferase | SAMN05216331_10139 | Not Available | Positive | 55067 - 56062 | 36799.2 |
| indole-3-glycerol phosphate synthase | SAMN05216331_10140 | Not Available | Positive | 56159 - 56956 | 29745.6 |
| phosphoribosylanthranilate isomerase | SAMN05216331_10141 | Not Available | Positive | 57123 - 57734 | 23152.7 |
| tryptophan synthase, alpha chain | SAMN05216331_10142 | Not Available | Positive | 57881 - 58651 | 28087.3 |
| uncharacterized membrane protein | SAMN05216331_10143 | Not Available | Positive | 58760 - 59644 | 32015.4 |
| protein of unknown function | SAMN05216331_10144 | Not Available | Negative | 59714 - 60868 | 43953.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216331_10145 | Not Available | Negative | 60873 - 63629 | 105310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
