Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05216331_10369 | Not Available | Negative | 539044 - 539979 | 34467.1 |
| transcriptional regulator, laci family | SAMN05216331_10370 | Not Available | Negative | 540121 - 541101 | 36778.6 |
| hypothetical protein | SAMN05216331_10371 | Not Available | Negative | 541049 - 541180 | 4966.16 |
| l-ribulokinase | SAMN05216331_10372 | Not Available | Negative | 541610 - 543244 | 59014.4 |
| mfs transporter, fhs family, l-fucose permease | SAMN05216331_10373 | Not Available | Negative | 543245 - 544693 | 52361.3 |
| hypothetical protein | SAMN05216331_10374 | Not Available | Negative | 544846 - 546099 | 46299.6 |
| hypothetical protein | SAMN05216331_10375 | Not Available | Negative | 546200 - 548329 | 81622.4 |
| protein of unknown function | SAMN05216331_10376 | Not Available | Negative | 548388 - 550334 | 74526.6 |
| protein of unknown function | SAMN05216331_10377 | Not Available | Negative | 550391 - 551557 | 44821.8 |
| beta-glucocerebrosidase 2 n terminal | SAMN05216331_10378 | Not Available | Negative | 551622 - 554660 | 112848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
