Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_10339 | Not Available | Negative | 492168 - 492815 | 24120.8 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05216331_10340 | Not Available | Positive | 493218 - 495092 | 69960.1 |
| adenine phosphoribosyltransferase | SAMN05216331_10341 | Not Available | Positive | 495393 - 495917 | 19540.8 |
| excinuclease abc subunit c | SAMN05216331_10342 | Not Available | Positive | 496007 - 497812 | 69836.0 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05216331_10343 | Not Available | Positive | 497809 - 498261 | 16522.1 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05216331_10344 | Not Available | Positive | 498368 - 498709 | 12982.4 |
| deoxyribose-phosphate aldolase | SAMN05216331_10345 | Not Available | Positive | 498737 - 499606 | 31614.4 |
| beta-galactosidase | SAMN05216331_10346 | Not Available | Positive | 499711 - 503112 | 129546.0 |
| calcineurin-like phosphoesterase | SAMN05216331_10347 | Not Available | Positive | 503442 - 505010 | 59701.1 |
| heat shock protein hsp20 | SAMN05216331_10348 | Not Available | Positive | 505383 - 505808 | 16360.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
