Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 37269 - 37859 | 18.01 |
| rna methyltransferase, trmh family | SAMN05216331_10127 | Not Available | Positive | 37714 - 38499 | 28818.8 |
| glycosyl hydrolases family 16 | SAMN05216331_10128 | Not Available | Negative | 38514 - 39359 | 32240.5 |
| starch-binding associating with outer membrane | SAMN05216331_10129 | Not Available | Negative | 39469 - 41004 | 57205.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_10130 | Not Available | Negative | 41038 - 44451 | 125544.0 |
| fecr family protein | SAMN05216331_10131 | Not Available | Negative | 44687 - 45664 | 37226.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216331_10132 | Not Available | Negative | 45734 - 46318 | 23090.9 |
| prolyl oligopeptidase family protein | SAMN05216331_10133 | Not Available | Negative | 46444 - 49230 | 106566.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05216331_10134 | Not Available | Positive | 49488 - 50564 | 40715.4 |
| predicted nuclease of the rnase h fold, hicb family | SAMN05216331_10135 | Not Available | Negative | 50623 - 50967 | 12968.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
