Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain | SAMN05216331_1039 | Not Available | Positive | 447409 - 448116 | 24947.8 |
| protein of unknown function | SAMN05216331_10310 | Not Available | Negative | 448233 - 450008 | 67398.9 |
| beta-xylosidase | SAMN05216331_10311 | Not Available | Negative | 450111 - 451652 | 57796.8 |
| aspartate kinase | SAMN05216331_10312 | Not Available | Positive | 452265 - 454709 | 89312.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMN05216331_10313 | Not Available | Positive | 454716 - 455927 | 44528.6 |
| l-threonine synthase | SAMN05216331_10314 | Not Available | Positive | 456039 - 457340 | 47971.4 |
| hypothetical protein | SAMN05216331_10315 | Not Available | Positive | 457425 - 460211 | 105794.0 |
| putative atpase | SAMN05216331_10316 | Not Available | Negative | 460208 - 461467 | 46722.3 |
| cytochrome c554 and c-prime | SAMN05216331_10317 | Not Available | Negative | 461610 - 462557 | 35475.8 |
| gmc oxidoreductase | SAMN05216331_10318 | Not Available | Negative | 462569 - 462937 | 12689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
