Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_102106 | Not Available | Negative | 411989 - 412870 | 32775.8 |
| trigger factor | SAMN05216331_102107 | Not Available | Positive | 413056 - 414588 | 58617.8 |
| hypothetical protein | SAMN05216331_102108 | Not Available | Negative | 414619 - 414753 | 4963.18 |
| atp-dependent clp protease, protease subunit | SAMN05216331_102109 | Not Available | Positive | 414767 - 415441 | 24699.7 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05216331_102110 | Not Available | Positive | 415445 - 416689 | 46227.0 |
| atp-dependent dna helicase recq | SAMN05216331_102111 | Not Available | Positive | 416896 - 419145 | 84901.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05216331_102112 | Not Available | Positive | 419331 - 421292 | 72971.8 |
| trk system potassium uptake protein trka | SAMN05216331_102113 | Not Available | Positive | 421323 - 422660 | 49813.8 |
| trk system potassium uptake protein trkh | SAMN05216331_102114 | Not Available | Positive | 422699 - 424189 | 55577.5 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216331_102115 | Not Available | Negative | 424290 - 426878 | 97676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
