Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde 3-phosphate dehydrogenase (nad(p)+) | SAMN05216331_1802 | Not Available | Positive | 4116564 - 4117592 | 38095.9 |
| rhodanese-related sulfurtransferase | SAMN05216331_1803 | Not Available | Positive | 4117680 - 4118099 | 15868.6 |
| hypothetical protein | SAMN05216331_1804 | Not Available | Positive | 4118435 - 4118596 | 6105.56 |
| rhs repeat-associated core domain-containing protein | SAMN05216331_1811 | Not Available | Positive | 4118597 - 4119765 | 42238.0 |
| hypothetical protein | SAMN05216331_1812 | Not Available | Positive | 4119765 - 4120217 | 17513.9 |
| rhs repeat-associated core domain-containing protein | SAMN05216331_1813 | Not Available | Positive | 4120459 - 4121667 | 42908.9 |
| hypothetical protein | SAMN05216331_1814 | Not Available | Positive | 4121672 - 4122085 | 15853.3 |
| hypothetical protein | SAMN05216331_1815 | Not Available | Positive | 4122390 - 4122613 | 8048.44 |
| phage integrase family protein | SAMN05216331_1821 | Not Available | Negative | 4122790 - 4123440 | 24938.5 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN05216331_1822 | Not Available | Positive | 4124691 - 4125119 | 16247.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
