Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin phd_yefm, type ii toxin-antitoxin system | SAMN05216331_1785 | Not Available | Positive | 4109061 - 4109315 | 9769.03 |
| hypothetical protein | SAMN05216331_1786 | Not Available | Positive | 4109312 - 4109435 | 5077.19 |
| transposase zinc-ribbon domain-containing protein | SAMN05216331_1791 | Not Available | Negative | 4109436 - 4109696 | 10586.7 |
| superfamily ii dna and rna helicase | SAMN05216331_1792 | Not Available | Positive | 4109978 - 4111120 | 42798.0 |
| hypothetical protein | SAMN05216331_1793 | Not Available | Positive | 4111098 - 4111277 | 6986.56 |
| helix-turn-helix | SAMN05216331_1794 | Not Available | Positive | 4111252 - 4111569 | 12012.3 |
| tspo and mbr related proteins | SAMN05216331_1795 | Not Available | Negative | 4111720 - 4112184 | 17763.4 |
| isxo2-like transposase domain-containing protein | SAMN05216331_1796 | Not Available | Positive | 4112457 - 4113473 | 40011.1 |
| transposase, is5 family | SAMN05216331_1797 | Not Available | Negative | 4113727 - 4114037 | 12072.1 |
| hypothetical protein | SAMN05216331_1801 | Not Available | Positive | 4114540 - 4116165 | 61843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
