Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase a | SAMN05216331_1752 | Not Available | Negative | 4088795 - 4090198 | 52517.1 |
| arylsulfatase a | SAMN05216331_1753 | Not Available | Negative | 4090295 - 4091833 | 57791.6 |
| alpha-l-fucosidase | SAMN05216331_1754 | Not Available | Negative | 4091836 - 4093227 | 52724.6 |
| hypothetical protein | SAMN05216331_1755 | Not Available | Negative | 4093312 - 4094052 | 28220.2 |
| helix-turn-helix domain-containing protein | SAMN05216331_1756 | Not Available | Positive | 4094101 - 4094416 | 12284.2 |
| transposase, is5 family | SAMN05216331_1761 | Not Available | Positive | 4094532 - 4095866 | 52346.4 |
| putative dna primase/helicase | SAMN05216331_1762 | Not Available | Negative | 4095889 - 4096932 | 39867.4 |
| helix-turn-helix domain-containing protein | SAMN05216331_1763 | Not Available | Negative | 4096929 - 4097162 | 9099.73 |
| dna binding domain-containing protein, excisionase family | SAMN05216331_1764 | Not Available | Negative | 4097164 - 4097508 | 13487.2 |
| hypothetical protein | SAMN05216331_1765 | Not Available | Negative | 4097659 - 4099122 | 57694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
