Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_1723 | Not Available | Negative | 4068272 - 4069690 | 55448.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216331_1724 | Not Available | Negative | 4069866 - 4070441 | 22212.6 |
| arac family transcriptional regulator | SAMN05216331_1725 | Not Available | Negative | 4070588 - 4070968 | 14632.7 |
| putative transposase | SAMN05216331_1726 | Not Available | Negative | 4071184 - 4072008 | 32165.6 |
| transposase | SAMN05216331_1727 | Not Available | Negative | 4072023 - 4072298 | 10521.7 |
| arac-like ligand binding domain-containing protein | SAMN05216331_1728 | Not Available | Negative | 4072325 - 4072720 | 15409.4 |
| uncharacterized protein, contains sis (sugar isomerase) phosphosugar binding domain | SAMN05216331_1729 | Not Available | Positive | 4072955 - 4073728 | 28904.5 |
| hypothetical protein | SAMN05216331_17210 | Not Available | Positive | 4073759 - 4074787 | 38715.6 |
| protein of unknown function | SAMN05216331_17211 | Not Available | Positive | 4075006 - 4075231 | 8800.99 |
| transposase zinc-ribbon domain-containing protein | SAMN05216331_1731 | Not Available | Negative | 4075232 - 4075416 | 7561.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
