Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | SAMN05216331_1679 | Not Available | Negative | 4029818 - 4031236 | 53165.5 |
| hypothetical protein | SAMN05216331_16710 | Not Available | Positive | 4031617 - 4031921 | 11616.2 |
| transposase | SAMN05216331_1681 | Not Available | Positive | 4031922 - 4032242 | 12290.7 |
| protein of unknown function | SAMN05216331_1682 | Not Available | Negative | 4032371 - 4032592 | 8665.77 |
| cob(i)alamin adenosyltransferase | SAMN05216331_1683 | Not Available | Negative | 4032650 - 4033210 | 21570.7 |
| hypothetical protein | SAMN05216331_1684 | Not Available | Negative | 4033287 - 4033985 | 26941.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05216331_1685 | Not Available | Negative | 4033996 - 4034475 | 17449.1 |
| hypothetical protein | SAMN05216331_1686 | Not Available | Negative | 4034480 - 4035607 | 41619.5 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05216331_1687 | Not Available | Negative | 4035669 - 4036283 | 23352.0 |
| redox-sensing transcriptional repressor | SAMN05216331_1688 | Not Available | Negative | 4036294 - 4036929 | 23178.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
