Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_1656 | Not Available | Negative | 4005920 - 4007023 | 40371.1 |
| signal transduction histidine kinase | SAMN05216331_1657 | Not Available | Positive | 4007255 - 4009180 | 72971.4 |
| two component transcriptional regulator, luxr family | SAMN05216331_1658 | Not Available | Positive | 4009230 - 4009841 | 22930.2 |
| transposase (or an inactivated derivative) | SAMN05216331_1659 | Not Available | Positive | 4010133 - 4011356 | 47129.3 |
| hypothetical protein | SAMN05216331_1661 | Not Available | Negative | 4011831 - 4012090 | 9931.86 |
| Trna-lys | Not Available | Not Available | Positive | 4012221 - 4012296 | Not Available |
| adenosylhomocysteinase | SAMN05216331_1663 | Not Available | Negative | 4012508 - 4013926 | 52435.0 |
| hypothetical protein | SAMN05216331_1664 | Not Available | Positive | 4014082 - 4014408 | 13318.3 |
| peptide methionine sulfoxide reductase msra/msrb | SAMN05216331_1665 | Not Available | Positive | 4014432 - 4015385 | 36355.9 |
| osmotically-inducible protein osmy, contains bon domain | SAMN05216331_1666 | Not Available | Positive | 4015494 - 4015979 | 16746.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
