Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonyl-trna synthetase | SAMN05216331_10117 | Not Available | Positive | 26411 - 28357 | 74499.0 |
| translation initiation factor if-3 | SAMN05216331_10118 | Not Available | Positive | 28438 - 28995 | 21543.3 |
| predicted dehydrogenase | SAMN05216331_10119 | Not Available | Negative | 29050 - 30321 | 46216.8 |
| phage integrase sam-like domain-containing protein | SAMN05216331_10120 | Not Available | Positive | 30570 - 31508 | 35532.6 |
| predicted kinase | SAMN05216331_10121 | Not Available | Positive | 31648 - 34500 | 107313.0 |
| large subunit ribosomal protein l35 | SAMN05216331_10122 | Not Available | Positive | 34618 - 34815 | 7316.29 |
| lsu ribosomal protein l20p | SAMN05216331_10123 | Not Available | Positive | 34916 - 35260 | 13372.4 |
| beta-xylosidase, gh43 family | SAMN05216331_10124 | Not Available | Positive | 35463 - 36587 | 41481.2 |
| hypothetical protein | SAMN05216331_10125 | Not Available | Positive | 36593 - 37096 | 19417.3 |
| thioredoxin | SAMN05216331_10126 | Not Available | Positive | 37215 - 37667 | 16997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
