Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216331_10246 | Not Available | Negative | 340954 - 342102 | 44942.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN05216331_10247 | Not Available | Negative | 342175 - 342648 | 18860.4 |
| uncharacterized protein | SAMN05216331_10248 | Not Available | Negative | 342679 - 343944 | 48161.2 |
| gdp-l-fucose synthase | SAMN05216331_10249 | Not Available | Negative | 344021 - 345106 | 41139.2 |
| gdpmannose 4,6-dehydratase | SAMN05216331_10250 | Not Available | Negative | 345099 - 346184 | 41488.8 |
| putative colanic acid biosysnthesis udp-glucose lipid carrier transferase | SAMN05216331_10251 | Not Available | Negative | 346332 - 347720 | 54283.2 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | SAMN05216331_10252 | Not Available | Negative | 347799 - 348569 | 29304.5 |
| hypothetical protein | SAMN05216331_10253 | Not Available | Negative | 348628 - 349551 | 35630.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05216331_10254 | Not Available | Negative | 349557 - 350669 | 42518.0 |
| glycosyltransferase, gt2 family | SAMN05216331_10255 | Not Available | Negative | 350742 - 351605 | 32821.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
