Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | SAMN05216331_10225 | Not Available | Positive | 309784 - 311085 | 48592.4 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05216331_10227 | Not Available | Positive | 311548 - 313539 | 75103.1 |
| hmuy protein | SAMN05216331_10228 | Not Available | Positive | 313628 - 314260 | 23176.3 |
| cobaltochelatase cobn subunit | SAMN05216331_10229 | Not Available | Positive | 314386 - 318651 | 157989.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216331_10230 | Not Available | Positive | 318738 - 321095 | 89397.6 |
| protein of unknown function | SAMN05216331_10231 | Not Available | Positive | 321107 - 322369 | 46018.5 |
| pepsy-associated tm region | SAMN05216331_10232 | Not Available | Positive | 322388 - 323857 | 56937.4 |
| sirohydrochlorin cobaltochelatase | SAMN05216331_10233 | Not Available | Positive | 323913 - 324839 | 34967.9 |
| precorrin-8x methylmutase | SAMN05216331_10234 | Not Available | Positive | 324869 - 326281 | 52075.9 |
| precorrin-6y c5,15-methyltransferase (decarboxylating) | SAMN05216331_10235 | Not Available | Positive | 326382 - 327566 | 45115.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
