Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide/tripeptide permease | SAMN05216331_10215 | Not Available | Negative | 282137 - 283528 | 50773.2 |
| dna mismatch repair protein muts2 | SAMN05216331_10216 | Not Available | Negative | 283627 - 286053 | 91991.7 |
| Trna-met | Not Available | Not Available | Positive | 286434 - 286510 | Not Available |
| hypothetical protein | SAMN05216331_10218 | Not Available | Positive | 286711 - 287322 | 22818.7 |
| hypothetical protein | SAMN05216331_10219 | Not Available | Positive | 287392 - 288810 | 52709.7 |
| hypothetical protein | SAMN05216331_10220 | Not Available | Negative | 288915 - 292214 | 125263.0 |
| virulence plasmid a protein | SAMN05216331_10221 | Not Available | Negative | 292243 - 298515 | 236873.0 |
| hypothetical protein | SAMN05216331_10222 | Not Available | Negative | 298556 - 299779 | 46646.4 |
| zinc dependent phospholipase c | SAMN05216331_10223 | Not Available | Negative | 299796 - 301778 | 73788.1 |
| rhs repeat-associated core domain-containing protein | SAMN05216331_10224 | Not Available | Negative | 301868 - 309490 | 287940.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
