Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical integral membrane protein | SAMN05216331_1025 | Not Available | Positive | 269052 - 270236 | 43194.9 |
| phosphohistidine phosphatase | SAMN05216331_1026 | Not Available | Negative | 270237 - 270725 | 18280.7 |
| protein of unknown function | SAMN05216331_1027 | Not Available | Positive | 270894 - 271721 | 31738.2 |
| l-threonine 3-dehydrogenase | SAMN05216331_1028 | Not Available | Negative | 271725 - 272750 | 37559.8 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05216331_1029 | Not Available | Negative | 272795 - 273985 | 44033.9 |
| dna recombination protein rmuc | SAMN05216331_10210 | Not Available | Negative | 274013 - 275524 | 57894.4 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05216331_10211 | Not Available | Negative | 275684 - 276904 | 45618.0 |
| lipopolysaccharide export system permease protein | SAMN05216331_10212 | Not Available | Negative | 276922 - 278880 | 74543.5 |
| hypothetical protein | SAMN05216331_10213 | Not Available | Negative | 279367 - 279756 | 15369.2 |
| glucosamine-6-phosphate deaminase | SAMN05216331_10214 | Not Available | Negative | 280050 - 282035 | 75369.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
