Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nigd-like protein | SAMN05216331_101216 | Not Available | Negative | 258344 - 259081 | 27665.4 |
| hypothetical protein | SAMN05216331_101217 | Not Available | Positive | 259570 - 259716 | 5513.8 |
| aspartate aminotransferase | SAMN05216331_101218 | Not Available | Positive | 259952 - 261148 | 43254.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05216331_101219 | Not Available | Negative | 261265 - 262122 | 32005.6 |
| calcineurin-like phosphoesterase | SAMN05216331_101220 | Not Available | Negative | 262119 - 263285 | 44505.7 |
| hypothetical protein | SAMN05216331_101221 | Not Available | Negative | 263447 - 263578 | 4938.74 |
| hypothetical protein | SAMN05216331_1021 | Not Available | Positive | 263579 - 263838 | 10195.3 |
| two component transcriptional regulator, lyttr family | SAMN05216331_1022 | Not Available | Negative | 263968 - 264678 | 27170.2 |
| histidine kinase | SAMN05216331_1023 | Not Available | Negative | 264650 - 265771 | 43810.6 |
| carboxypepd_reg-like domain-containing protein | SAMN05216331_1024 | Not Available | Negative | 265888 - 268719 | 105804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
