Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinogalactan endo-1,4-beta-galactosidase | SAMN05216331_1017 | Not Available | Positive | 13511 - 14548 | 39012.9 |
| beta-galactosidase | SAMN05216331_1018 | Not Available | Positive | 14636 - 17089 | 93751.6 |
| probable dna metabolism protein | SAMN05216331_1019 | Not Available | Positive | 17089 - 17856 | 30304.4 |
| large conductance mechanosensitive channel | SAMN05216331_10110 | Not Available | Negative | 17962 - 18345 | 13825.3 |
| hypothetical protein | SAMN05216331_10111 | Not Available | Negative | 18531 - 19433 | 33843.4 |
| ornithine--oxo-acid transaminase | SAMN05216331_10112 | Not Available | Negative | 19665 - 20900 | 45488.7 |
| protein of unknown function | SAMN05216331_10113 | Not Available | Negative | 21007 - 21645 | 23558.0 |
| response regulator receiver domain-containing protein | SAMN05216331_10114 | Not Available | Positive | 22009 - 23583 | 61255.7 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05216331_10115 | Not Available | Positive | 23651 - 24067 | 15706.7 |
| tetratricopeptide repeat-containing protein | SAMN05216331_10116 | Not Available | Positive | 24198 - 26267 | 79651.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
