Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase recj domain-containing protein | SAMN05216331_101176 | Not Available | Negative | 208940 - 210028 | 41307.4 |
| competence protein comec | SAMN05216331_101177 | Not Available | Negative | 210034 - 211998 | 74323.3 |
| ribulose-phosphate 3-epimerase | SAMN05216331_101178 | Not Available | Negative | 212116 - 212766 | 24051.6 |
| hypothetical protein | SAMN05216331_101179 | Not Available | Negative | 212879 - 213265 | 13508.0 |
| signal transduction histidine kinase | SAMN05216331_101180 | Not Available | Negative | 213480 - 216392 | 111333.0 |
| hmuy protein | SAMN05216331_101181 | Not Available | Positive | 216630 - 217235 | 22602.2 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05216331_101182 | Not Available | Positive | 217315 - 219522 | 82669.6 |
| cobaltochelatase cobn | SAMN05216331_101183 | Not Available | Positive | 219562 - 223665 | 152282.0 |
| hypothetical protein | SAMN05216331_101184 | Not Available | Positive | 223733 - 224440 | 27062.3 |
| outer membrane transport energization protein exbb | SAMN05216331_101185 | Not Available | Positive | 224440 - 225036 | 21990.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
