Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_101136 | Not Available | Negative | 159331 - 160545 | 45617.7 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216331_101137 | Not Available | Negative | 160832 - 161851 | 38126.2 |
| heparin/heparan-sulfate lyase | SAMN05216331_101138 | Not Available | Negative | 162065 - 164812 | 105939.0 |
| thiosulfate dehydrogenase | SAMN05216331_101139 | Not Available | Negative | 164867 - 165382 | 19440.6 |
| predicted dehydrogenase | SAMN05216331_101140 | Not Available | Negative | 165413 - 166951 | 58421.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216331_101141 | Not Available | Negative | 167011 - 168432 | 53830.3 |
| l-alanine-dl-glutamate epimerase | SAMN05216331_101142 | Not Available | Negative | 168458 - 169882 | 53505.7 |
| starch-binding associating with outer membrane | SAMN05216331_101143 | Not Available | Negative | 169974 - 171704 | 66325.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_101144 | Not Available | Negative | 171723 - 174914 | 118590.0 |
| dienelactone hydrolase family protein | SAMN05216331_101145 | Not Available | Negative | 174974 - 177607 | 100901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
