Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05216331_101126 | Not Available | Negative | 145571 - 146692 | 43412.2 |
| membrane associated serine protease, rhomboid family | SAMN05216331_101127 | Not Available | Negative | 146676 - 147563 | 33945.2 |
| membrane associated serine protease, rhomboid family | SAMN05216331_101128 | Not Available | Negative | 147547 - 148224 | 25571.8 |
| dna-binding protein hu-beta | SAMN05216331_101129 | Not Available | Positive | 148431 - 148697 | 9192.19 |
| Trna-lys | Not Available | Not Available | Positive | 148878 - 148950 | Not Available |
| l-fucose mutarotase | SAMN05216331_101131 | Not Available | Positive | 149143 - 149577 | 15641.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216331_101132 | Not Available | Positive | 149714 - 151057 | 49696.1 |
| starch-binding associating with outer membrane | SAMN05216331_101133 | Not Available | Negative | 151360 - 152979 | 61641.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216331_101134 | Not Available | Negative | 152992 - 156090 | 115771.0 |
| heparin/heparan-sulfate lyase | SAMN05216331_101135 | Not Available | Negative | 156471 - 159224 | 105077.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
