Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium KH3R12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1172546 bp
Thymine Count
1169459 bp
Guanine Count
899054 bp
Cytosine Count
910252 bp
Genome Length
4154516 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216331_101105 | Not Available | Negative | 119536 - 120642 | 41407.9 |
| ribosomal-protein-serine acetyltransferase | SAMN05216331_101106 | Not Available | Negative | 120964 - 121500 | 20670.9 |
| hypothetical protein | SAMN05216331_101107 | Not Available | Negative | 121604 - 122044 | 16951.3 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05216331_101108 | Not Available | Negative | 122166 - 123758 | 60017.6 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05216331_101109 | Not Available | Negative | 124232 - 124897 | 25303.1 |
| zinc transport system substrate-binding protein | SAMN05216331_101110 | Not Available | Positive | 125043 - 125984 | 35471.9 |
| zinc transport system atp-binding protein | SAMN05216331_101111 | Not Available | Positive | 126200 - 126991 | 29013.1 |
| hypothetical protein | SAMN05216331_101112 | Not Available | Positive | 126994 - 127479 | 16827.4 |
| aspartate semialdehyde dehydrogenase | SAMN05216331_101113 | Not Available | Negative | 127618 - 128619 | 36650.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216331_101115 | Not Available | Positive | 129242 - 131599 | 89205.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
