Cupriavidus sp. YR651

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Cupriavidus

Description

Cupriavidus sp. YR651 is a Gram-negative bacterium characterized by the presence of flagella, which facilitates motility. This trait is significant as it may contribute to the organism’s ability to navigate its environment, potentially influencing its ecological interactions. The bacterium has a single replicon, indicating a streamlined genomic structure that might be advantageous for efficient replication and adaptation to its surroundings. The taxonomic classification of Cupriavidus sp. YR651 is supported by its accession number FMYZ00000000.1, which provides a unique identifier for genetic and genomic studies, allowing researchers to access its genomic data for further analysis. This can be instrumental for understanding its metabolic pathways and potential applications in biotechnology or environmental science. In ecological terms, the motility conferred by flagella may enhance Cupriavidus sp. YR651's ability to colonize various environments, including soil and water systems, where it may play a role in nutrient cycling or bioremediation processes. The characteristics of this bacterium suggest potential avenues for research into its ecological functions and applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCupriavidus
SpeciesCupriavidus sp. YR651
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cupriavidus sp. YR651 genome assembly, contig: Ga0070129_146,

Gene Summary

Adenine Count

1224198 bp

Thymine Count

1224542 bp

Guanine Count

2249097 bp

Cytosine Count

2260496 bp

Genome Length

6960118 bp

Protein-coding Genes

6302 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamyl-q trna(asp) synthetaseSAMN05216345_101778Not AvailablePositive851441 - 85237934292.8
superfamily ii dna and rna helicaseSAMN05216345_101779Not AvailableNegative852450 - 85394654620.1
alkaline phosphatase dSAMN05216345_101780Not AvailablePositive854284 - 85592460213.2
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05216345_101781Not AvailableNegative855995 - 85695133499.8
propionate coa-transferaseSAMN05216345_101782Not AvailableNegative857059 - 85870258213.4
transcriptional regulator, iclr familySAMN05216345_101783Not AvailablePositive858930 - 85973329280.7
glutathione s-transferaseSAMN05216345_101784Not AvailableNegative859982 - 86059022184.9
transcriptional regulator, asnc familySAMN05216345_101785Not AvailablePositive860758 - 86121616488.2
2-keto-3-deoxygluconate permeaseSAMN05216345_101786Not AvailablePositive861419 - 86240833506.0
uncharacterized conserved protein ygbk, duf1537 familySAMN05216345_101787Not AvailablePositive862405 - 86364042344.6

Displaying genes 781 – 790 of 6362 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

463 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000198tetracenomycin CC23H20O11Chemical structure of tetracenomycin CNot available
Average472.402Da
Monoisotopic472.100561464Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 463 metabolites

Health Effects

No health effects information available for this bacterium.