Tardiphaga sp. OK246

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Tardiphaga

Description

Tardiphaga sp. OK246 is characterized by having a single replicon, which simplifies its genomic structure in comparison to species with multiple replicons. The organism is cataloged under the accession number FZOX00000000.1, which provides a unique identifier for its genomic data, facilitating research and reference within the scientific community. The presence of a single replicon suggests a streamlined genetic architecture, which may be advantageous for efficient replication and regulation of genetic functions. This trait can be common among various microorganisms, potentially influencing their adaptability and survival in specific environments. Understanding the genomic characteristics of Tardiphaga sp. OK246 can provide insights into its biological functions and ecological roles. The simplified genomic structure may reflect its evolutionary adaptations to niche environments, where genetic efficiency could play a critical role in its survival and reproduction. Further research into the ecological interactions and environmental conditions surrounding Tardiphaga sp. OK246 could reveal how its genomic features contribute to its ecological strategies, such as nutrient acquisition, resistance to stressors, or symbiotic relationships with other microorganisms. This knowledge can enhance our understanding of microbial diversity and the ecological dynamics in which Tardiphaga sp. OK246 participates.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusTardiphaga
SpeciesTardiphaga sp. OK246
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tardiphaga sp. OK246 genome assembly, contig: Ga0066777_119, whole

Gene Summary

Adenine Count

1307301 bp

Thymine Count

1300896 bp

Guanine Count

2067405 bp

Cytosine Count

2073029 bp

Genome Length

6748631 bp

Protein-coding Genes

6221 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase family m23SAMN05216374_0455Not AvailablePositive52390 - 5335534813.3
hypothetical proteinSAMN05216374_0459Not AvailableNegative55823 - 560447781.72
predicted dna-binding protein, contains ribbon-helix-helix (rhh) domainSAMN05216374_0460Not AvailableNegative56198 - 564438853.58
hlyd family secretion proteinSAMN05216374_0461Not AvailableNegative56588 - 5793149717.0
ca2+-binding protein, rtx toxin-relatedSAMN05216374_0462Not AvailableNegative57952 - 6028879803.4
atp-binding cassette, subfamily cSAMN05216374_0463Not AvailableNegative60285 - 6203662599.8
ca2+-binding protein, rtx toxin-relatedSAMN05216374_0464Not AvailableNegative62119 - 69090239030.0
hypothetical proteinSAMN05216374_0465Not AvailablePositive69637 - 7104651321.6
two component transcriptional regulator, luxr familySAMN05216374_0466Not AvailablePositive71203 - 7186223698.0
hypothetical proteinSAMN05216374_0467Not AvailableNegative72409 - 726367812.49

Displaying genes 61 – 70 of 6281 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.