Duganella sp. CF402

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF402 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure and organization. The genomic data for this organism is cataloged under the accession number FOBG00000000.1, providing a reference point for further studies and analysis. As a member of the Duganella genus, this bacterium is likely to be part of diverse ecological niches, contributing to various biochemical processes in its environment. While specific metabolic capabilities or ecological roles of Duganella sp. CF402 are not detailed in the provided traits, Gram-negative bacteria often play significant roles in nutrient cycling and can participate in interactions with other microbial communities. The presence of a single replicon may suggest a streamlined genomic organization that can be advantageous in certain environments, potentially allowing for efficient replication and adaptation to changing conditions. This trait highlights the evolutionary strategies that microorganisms like Duganella sp. CF402 may employ to thrive in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF402
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF402 genome assembly, contig: Ga0066743_114, whole

Gene Summary

Adenine Count

1161338 bp

Thymine Count

1152073 bp

Guanine Count

1943844 bp

Cytosine Count

1982570 bp

Genome Length

6240445 bp

Protein-coding Genes

5436 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216319_0575Not AvailablePositive624340 - 62652380323.7
uncharacterized conserved protein, duf885 familytSAMN05216319_0576Not AvailablePositive626541 - 62831066392.4
uncharacterized conserved protein ydga, duf945 familySAMN05216319_0577Not AvailablePositive628419 - 62967544665.8
hypothetical proteinSAMN05216319_0578Not AvailablePositive629668 - 63023721815.9
rna polymerase sigma factor, sigma-70 familySAMN05216319_0579Not AvailableNegative630234 - 63089023668.4
atp-dependent clp protease, protease subunitSAMN05216319_0580Not AvailablePositive631040 - 63163321558.8
nucleoside-diphosphate-sugar epimeraseSAMN05216319_0581Not AvailableNegative631630 - 63252331638.6
spore coat protein u (scpu) domain-containing proteinSAMN05216319_0582Not AvailableNegative632721 - 63324217233.2
urease accessory proteinSAMN05216319_0583Not AvailablePositive633586 - 63446131717.0
urease subunit gammaSAMN05216319_0584Not AvailablePositive634476 - 63477810918.5

Displaying genes 571 – 580 of 5503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.