Duganella sp. CF402

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sp. CF402 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is indicative of its genetic structure and organization. The genomic data for this organism is cataloged under the accession number FOBG00000000.1, providing a reference point for further studies and analysis. As a member of the Duganella genus, this bacterium is likely to be part of diverse ecological niches, contributing to various biochemical processes in its environment. While specific metabolic capabilities or ecological roles of Duganella sp. CF402 are not detailed in the provided traits, Gram-negative bacteria often play significant roles in nutrient cycling and can participate in interactions with other microbial communities. The presence of a single replicon may suggest a streamlined genomic organization that can be advantageous in certain environments, potentially allowing for efficient replication and adaptation to changing conditions. This trait highlights the evolutionary strategies that microorganisms like Duganella sp. CF402 may employ to thrive in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sp. CF402
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sp. CF402 genome assembly, contig: Ga0066743_114, whole

Gene Summary

Adenine Count

1161338 bp

Thymine Count

1152073 bp

Guanine Count

1943844 bp

Cytosine Count

1982570 bp

Genome Length

6240445 bp

Protein-coding Genes

5436 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa thioester hydrolaseSAMN05216319_0184Not AvailablePositive187701 - 18815616991.3
pgap1-like proteinSAMN05216319_0185Not AvailablePositive188178 - 18912834106.7
pas foldSAMN05216319_0186Not AvailablePositive189199 - 19068353621.8
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216319_0187Not AvailablePositive190700 - 194353134201.0
lipopolysaccharide export system protein lptaSAMN05216319_0188Not AvailableNegative194391 - 19496320967.0
amino acid abc transporter substrate-binding protein, paat family (tc 3.a.1.3.-)SAMN05216319_0189Not AvailablePositive195052 - 19581328386.5
hypothetical proteinSAMN05216319_0190Not AvailablePositive195878 - 19624313002.8
transcriptional regulator, tetr familySAMN05216319_0191Not AvailablePositive196345 - 19701026329.8
hypothetical proteinSAMN05216319_0192Not AvailablePositive197023 - 19781129310.9
hypothetical proteinSAMN05216319_0193Not AvailablePositive197804 - 19834019327.8

Displaying genes 181 – 190 of 5503 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.