Sphingomonas palmae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas palmae is a rod-shaped bacterium that possesses flagella, enabling motility. This organism is characterized by having a single replicon, which is indicative of its genomic structure. The accession number for Sphingomonas palmae is FNZZ00000000.1, which serves as a reference for its genomic data. The presence of flagella is a notable trait, as it suggests that Sphingomonas palmae is capable of active movement in its environment, potentially aiding in its colonization and interaction with various ecological niches. The single replicon indicates a streamlined genomic organization, which could have implications for its metabolic capabilities and adaptability. From a biological perspective, the rod shape and motility provided by flagella may enhance the bacterium's ability to thrive in specific habitats, possibly allowing it to navigate towards nutrients or away from unfavorable conditions. This adaptability is vital for survival in diverse ecological contexts, where competition and environmental changes can influence microbial community dynamics. Understanding the traits of Sphingomonas palmae can contribute to broader insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas palmae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas palmae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. JS21-1 genome assembly, contig: Ga0075249_111,

Gene Summary

Adenine Count

536988 bp

Thymine Count

532174 bp

Guanine Count

1088605 bp

Cytosine Count

1114503 bp

Genome Length

3272897 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoic acid synthetaseSAMN05216382_0304Not AvailableNegative293409 - 29434134116.1
carbonic anhydraseSAMN05216382_0305Not AvailablePositive294393 - 29502822812.0
amino acid/polyamine/organocation transporter, apc superfamilySAMN05216382_0306Not AvailableNegative295049 - 29643448276.6
aspartyl-trna synthetaseSAMN05216382_0307Not AvailableNegative296512 - 29833867570.2
ribonuclease dSAMN05216382_0308Not AvailablePositive298488 - 29966343265.9
peptidase inhibitor i78 family proteinSAMN05216382_0309Not AvailablePositive299660 - 2999449881.91
hypothetical proteinSAMN05216382_0310Not AvailablePositive299976 - 30110639838.8
single-stranded-dna-specific exonucleaseSAMN05216382_0311Not AvailablePositive301137 - 30220737300.2
xanthine dehydrogenase yagt iron-sulfur-binding subunitSAMN05216382_0312Not AvailablePositive302296 - 30282318336.0
xanthine dehydrogenase yags fad-binding subunitSAMN05216382_0313Not AvailablePositive302820 - 30380334415.0

Displaying genes 301 – 310 of 3171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.