Sphingomonas palmae

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas palmae is a rod-shaped bacterium that possesses flagella, enabling motility. This organism is characterized by having a single replicon, which is indicative of its genomic structure. The accession number for Sphingomonas palmae is FNZZ00000000.1, which serves as a reference for its genomic data. The presence of flagella is a notable trait, as it suggests that Sphingomonas palmae is capable of active movement in its environment, potentially aiding in its colonization and interaction with various ecological niches. The single replicon indicates a streamlined genomic organization, which could have implications for its metabolic capabilities and adaptability. From a biological perspective, the rod shape and motility provided by flagella may enhance the bacterium's ability to thrive in specific habitats, possibly allowing it to navigate towards nutrients or away from unfavorable conditions. This adaptability is vital for survival in diverse ecological contexts, where competition and environmental changes can influence microbial community dynamics. Understanding the traits of Sphingomonas palmae can contribute to broader insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas palmae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas palmae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. JS21-1 genome assembly, contig: Ga0075249_111,

Gene Summary

Adenine Count

536988 bp

Thymine Count

532174 bp

Guanine Count

1088605 bp

Cytosine Count

1114503 bp

Genome Length

3272897 bp

Protein-coding Genes

3110 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding protein hfqSAMN05216382_0294Not AvailableNegative282940 - 28342217844.8
two-component system, ntrc family, nitrogen regulation response regulator ntrxSAMN05216382_0295Not AvailableNegative283563 - 28493349935.2
two-component system, ntrc family, nitrogen regulation sensor histidine kinase ntrySAMN05216382_0296Not AvailableNegative284938 - 28713980006.1
two-component system, ntrc family, nitrogen regulation response regulator glngSAMN05216382_0297Not AvailableNegative287231 - 28866451518.8
two-component system, ntrc family, nitrogen regulation sensor histidine kinase glnlSAMN05216382_0298Not AvailableNegative288664 - 28972237418.4
pp_00273SAMN05216382_0299Not AvailableNegative289722 - 290720Not Available
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseSAMN05216382_0300Not AvailablePositive290752 - 29193041433.5
hypothetical proteinSAMN05216382_0301Not AvailablePositive291927 - 29245418555.7
nicotinamide-nucleotide amidaseSAMN05216382_0302Not AvailablePositive292451 - 29298717848.3
coenzyme q-binding protein coq10SAMN05216382_0303Not AvailableNegative292927 - 29340918078.6

Displaying genes 291 – 300 of 3171 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.