Halolamina sp. CBA1230

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halolamina

Description

Halolamina sp. CBA1230 is characterized by having four distinct replicons, which are essential for its genetic stability and replication processes. The organism has been cataloged with several accessions, specifically NZ_CP054590.1, NZ_CP054587.1, NZ_CP054588.1, and NZ_CP054589.1. These accessions represent different segments of its genomic information, providing a comprehensive view of its genetic makeup. The presence of multiple replicons in Halolamina sp. CBA1230 may indicate a sophisticated level of genetic regulation and adaptability, allowing it to thrive in diverse environments. This feature can be particularly advantageous in fluctuating ecological conditions, as it might facilitate the organism's ability to acquire and express various genes that contribute to its survival and metabolic capabilities. In microbial ecology, such organisms often play significant roles in biogeochemical cycles, especially in extreme environments where they might be found. The genetic diversity conferred by multiple replicons can enhance the organism's resilience and functionality, enabling it to contribute to nutrient cycling and other ecological processes effectively. Understanding the genomic structure of Halolamina sp. CBA1230 may provide insights into the evolutionary adaptations of microorganisms in extreme habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalolamina
SpeciesHalolamina sp. CBA1230
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halolamina sp. CBA1230 plasmid pCBA1230-03, complete sequence.

Gene Summary

Adenine Count

11448 bp

Thymine Count

10809 bp

Guanine Count

15613 bp

Cytosine Count

15036 bp

Genome Length

52906 bp

Protein-coding Genes

54 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate mutaseB4589_RS03965Not AvailableNegative788913 - 78920311108.9
shikimate kinaseB4589_RS03970Not AvailableNegative789200 - 79008729960.4
ghmp kinaseB4589_RS03975Not AvailableNegative790154 - 79093326712.1
dna-directed rna polymerase subunit lB4589_RS03980Not AvailablePositive791545 - 79183210093.6
imidazole glycerol phosphate synthase subunit hisfB4589_RS03985Not AvailableNegative791888 - 79270329044.4
hypothetical proteinB4589_RS18120Not AvailablePositive792860 - 7929944960.45
hypothetical proteinB4589_RS03990Not AvailableNegative793007 - 79342914384.6
duf5796 family proteinB4589_RS03995Not AvailableNegative793472 - 79391216010.4
duf5803 family proteinB4589_RS04000Not AvailableNegative793967 - 79475828557.4
duf2110 family proteinB4589_RS04005Not AvailableNegative794769 - 79546124821.6

Displaying genes 851 – 860 of 3642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.