Halolamina sp. CBA1230

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halolamina

Description

Halolamina sp. CBA1230 is characterized by having four distinct replicons, which are essential for its genetic stability and replication processes. The organism has been cataloged with several accessions, specifically NZ_CP054590.1, NZ_CP054587.1, NZ_CP054588.1, and NZ_CP054589.1. These accessions represent different segments of its genomic information, providing a comprehensive view of its genetic makeup. The presence of multiple replicons in Halolamina sp. CBA1230 may indicate a sophisticated level of genetic regulation and adaptability, allowing it to thrive in diverse environments. This feature can be particularly advantageous in fluctuating ecological conditions, as it might facilitate the organism's ability to acquire and express various genes that contribute to its survival and metabolic capabilities. In microbial ecology, such organisms often play significant roles in biogeochemical cycles, especially in extreme environments where they might be found. The genetic diversity conferred by multiple replicons can enhance the organism's resilience and functionality, enabling it to contribute to nutrient cycling and other ecological processes effectively. Understanding the genomic structure of Halolamina sp. CBA1230 may provide insights into the evolutionary adaptations of microorganisms in extreme habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalolamina
SpeciesHalolamina sp. CBA1230
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halolamina sp. CBA1230 plasmid pCBA1230-03, complete sequence.

Gene Summary

Adenine Count

11448 bp

Thymine Count

10809 bp

Guanine Count

15613 bp

Cytosine Count

15036 bp

Genome Length

52906 bp

Protein-coding Genes

54 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribbon-helix-helix domain-containing proteinB4589_RS10555Not AvailablePositive2003217 - 200349210494.8
type ii toxin-antitoxin system rele family toxinB4589_RS10560Not AvailablePositive2003482 - 200376610981.7
duf460 domain-containing proteinB4589_RS10565Not AvailableNegative2003770 - 200576774983.3
hypothetical proteinB4589_RS10570Not AvailableNegative2005811 - 20059515380.19
ribonuclease zB4589_RS10575Not AvailableNegative2005994 - 200692634150.6
aaa family atpaseB4589_RS10580Not AvailablePositive2007047 - 200806937651.9
protein sorting system archaetidylserine decarboxylaseB4589_RS10585Not AvailablePositive2008069 - 200868021679.7
methyltransferase domain-containing proteinB4589_RS10590Not AvailableNegative2009129 - 201019337612.9
hypothetical proteinB4589_RS10595Not AvailablePositive2010283 - 20104776835.52
hypothetical proteinB4589_RS10600Not AvailablePositive2010565 - 201097814702.1

Displaying genes 2181 – 2190 of 3642 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.