Halarchaeum sp. CBA1220

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Halobacteriaceae

Genus

Halarchaeum

Description

Halarchaeum sp. CBA1220 is a member of the archaeal domain, characterized by its unique genetic structure, which includes a total of six replicons. This trait is significant as it may influence the organism's adaptability and genetic diversity. The specific accessions associated with Halarchaeum sp. CBA1220 include NZ_CP054710.1, NZ_CP054707.1, NZ_CP054708.1, NZ_CP054709.1, NZ_CP054711.1, and NZ_CP054712.1. Each accession corresponds to different segments of its genomic information, reflecting the organism's complex genomic architecture. The presence of multiple replicons can provide various advantages in extreme environments, where Halarchaeum sp. CBA1220 is likely to thrive. Such adaptations may include enhanced resilience to environmental stressors, increased capacity for horizontal gene transfer, and improved metabolic versatility. These traits are particularly relevant in extreme habitats where this archaeon may be found, such as hypersaline environments or high-temperature settings, reflecting the ecological niches that members of the Halarchaeum genus typically occupy. Overall, the genomic complexity of Halarchaeum sp. CBA1220, as indicated by its six replicons, suggests a potential for significant ecological adaptability, which may play a crucial role in its survival and functional contributions to microbial communities in extreme environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHalobacteriaceae
GenusHalarchaeum
SpeciesHalarchaeum sp. CBA1220
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halarchaeum sp. CBA1220 plasmid pCBA1220-05, complete sequence.

Gene Summary

Adenine Count

2792 bp

Thymine Count

2577 bp

Guanine Count

4677 bp

Cytosine Count

4514 bp

Genome Length

14560 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEFA46_RS16080Not AvailablePositive8535 - 87658277.59
phage/plasmid primase, p4 familyEFA46_RS16085Not AvailablePositive9509 - 12826123477.0
ribbon-helix-helix domain-containing proteinEFA46_RS16090Not AvailableNegative12808 - 1355427419.5
hypothetical proteinEFA46_RS16095Not AvailablePositive13732 - 139086698.49
hypothetical proteinEFA46_RS16100Not AvailablePositive13920 - 1438717619.4
Putative histone deacetylase proteinEFA46_RS05255Not AvailablePositive974270 - 97529236317.4
cca trna nucleotidyltransferaseEFA46_RS05260Not AvailableNegative975271 - 97663550220.4
Trna-asn;Not AvailableNot AvailablePositive976737 - 976809Not Available
Trna-ile;Not AvailableNot AvailablePositive976916 - 976991Not Available
AttlNot AvailableNot AvailablePositive976977 - 976994Not Available

Displaying genes 11 – 20 of 3236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.